Version 5.4
Mus musculus Gene: Pan3
Summary
InnateDB Gene IDBG-209068.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pan3
Gene Name PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
Synonyms 2700050F09Rik; A430027N15Rik; AU014670
Species Mus musculus
Ensembl Gene ENSMUSG00000029647
Encoded Proteins
IDBP-209070
PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
IDBP-725038
IDBP-725013
IDBP-724988
IDBP-725210
IDBP-725208
IDBP-725158
IDBP-725043
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000152520:
Gene Information
Type Protein coding
Genomic Location Chromosome 5:147430161-147548502
Strand Forward strand
Band G3
Transcripts
ENSMUST00000031651 ENSMUSP00000031651
ENSMUST00000177327
ENSMUST00000176505
ENSMUST00000176753 ENSMUSP00000134989
ENSMUST00000176817
ENSMUST00000176357
ENSMUST00000176466 ENSMUSP00000135673
ENSMUST00000176202
ENSMUST00000177465 ENSMUSP00000134810
ENSMUST00000175807 ENSMUSP00000135729
ENSMUST00000176600 ENSMUSP00000135367
ENSMUST00000177328
ENSMUST00000176553 ENSMUSP00000134911
ENSMUST00000176596 ENSMUSP00000135477
ENSMUST00000177496
ENSMUST00000176806
ENSMUST00000176856
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 12 interaction(s) predicted by orthology.
Predicted by orthology
Total 12 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004535 poly(A)-specific ribonuclease activity
GO:0004672 protein kinase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016772 transferase activity, transferring phosphorus-containing groups
GO:0046872 metal ion binding
Biological Process
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0006397 mRNA processing
GO:0006468 protein phosphorylation
GO:0006605 protein targeting
GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly
GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
Cellular Component
GO:0000932 cytoplasmic mRNA processing body
GO:0005813 centrosome
GO:0031251 PAN complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000152520
View Gene Order
ENSBTAG00000009912
Not yet available
Pathways
NETPATH
REACTOME
REACT_244119
Deadenylation of mRNA pathway
REACT_233572
Gene Expression pathway
REACT_235784
Deadenylation-dependent mRNA decay pathway
KEGG
mmu03018
RNA degradation pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_20514
Deadenylation of mRNA pathway
REACT_20639
Deadenylation-dependent mRNA decay pathway
REACT_71
Gene Expression pathway
KEGG
hsa03018
RNA degradation pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.489723
RefSeq NM_028291 XM_006504870 XM_006504874 XM_006504875 XM_006504876 XM_006504877 XM_006504878 XM_006504879 XM_006504880
OMIM
CCDS CCDS39401
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca