Version 5.4
Mus musculus Gene: Cpeb3
Summary
InnateDB Gene IDBG-161232.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Cpeb3
Gene Name cytoplasmic polyadenylation element binding protein 3
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000039652
Encoded Proteins
IDBP-161234
cytoplasmic polyadenylation element binding protein 3
IDBP-537582
cytoplasmic polyadenylation element binding protein 3
IDBP-532010
cytoplasmic polyadenylation element binding protein 3
IDBP-539274
cytoplasmic polyadenylation element binding protein 3
IDBP-537355
cytoplasmic polyadenylation element binding protein 3
IDBP-534246
cytoplasmic polyadenylation element binding protein 3
IDBP-534881
cytoplasmic polyadenylation element binding protein 3
IDBP-535809
cytoplasmic polyadenylation element binding protein 3
IDBP-541279
cytoplasmic polyadenylation element binding protein 3
IDBP-533015
cytoplasmic polyadenylation element binding protein 3
IDBP-540031
cytoplasmic polyadenylation element binding protein 3
IDBP-531828
cytoplasmic polyadenylation element binding protein 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000107864:
Gene Information
Type Protein coding
Genomic Location Chromosome 19:37021291-37208601
Strand Reverse strand
Band C2
Transcripts
ENSMUST00000079754 ENSMUSP00000078690
ENSMUST00000124158 ENSMUSP00000115656
ENSMUST00000154376 ENSMUSP00000116172
ENSMUST00000136286 ENSMUSP00000116309
ENSMUST00000126188 ENSMUSP00000120416
ENSMUST00000132580 ENSMUSP00000118723
ENSMUST00000123727 ENSMUSP00000121987
ENSMUST00000126781 ENSMUSP00000122442
ENSMUST00000133988 ENSMUSP00000116749
ENSMUST00000142973 ENSMUSP00000117242
ENSMUST00000131917 ENSMUSP00000123080
ENSMUST00000128642 ENSMUSP00000115038
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0000900 translation repressor activity, nucleic acid binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003730 mRNA 3'-UTR binding
GO:0005515 protein binding
GO:0008135 translation factor activity, nucleic acid binding
GO:0035613 RNA stem-loop binding
GO:0035925 mRNA 3'-UTR AU-rich region binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0006412 translation
GO:0007616 long-term memory
GO:0017148 negative regulation of translation
GO:0045727 positive regulation of translation
GO:0048167 regulation of synaptic plasticity
GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0060998 regulation of dendritic spine development
GO:0060999 positive regulation of dendritic spine development
GO:0061158 3'-UTR-mediated mRNA destabilization
GO:0071230 cellular response to amino acid stimulus
GO:1900153 positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:1900248 negative regulation of cytoplasmic translational elongation
GO:1900365 positive regulation of mRNA polyadenylation
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0030014 CCR4-NOT complex
GO:0030425 dendrite
GO:0043005 neuron projection
GO:0045202 synapse
GO:0097440 apical dendrite
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000107864
View Gene Order
ENSBTAG00000015450
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04320
Dorso-ventral axis formation pathway
mmu04914
Progesterone-mediated oocyte maturation pathway
mmu04114
Oocyte meiosis pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04320
Dorso-ventral axis formation pathway
hsa04914
Progesterone-mediated oocyte maturation pathway
hsa04114
Oocyte meiosis pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL D3YUL6 D3YXB8 D3Z3Z5 D3Z5F3 D3Z5R9
UniProt Splice Variant
Entrez Gene 208922
UniGene Mm.391176 Mm.470374
RefSeq NM_001290826 NM_001290827 NM_001290828 NM_001290829 NM_198300 XM_006526829 XM_006526830 XM_006526831 XM_006526832 XM_006526833 XM_006526834 XM_006526835 XM_006526836 XM_006526837 XM_006526838 XM_006526839 XM_006526840
OMIM
CCDS CCDS29775 CCDS70946 CCDS70947
HPRD
IMGT
MGI ID MGI:2443075
MGI Symbol Cpeb3
EMBL AC113124 AC118931 AC161238
GenPept
RNA Seq Atlas 208922

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca