Version 5.4
Homo sapiens Gene: ATXN7L3
Summary
InnateDB Gene IDBG-53490.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ATXN7L3
Gene Name ataxin 7-like 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000087152
Encoded Proteins
IDBP-53494
ataxin 7-like 3
IDBP-379499
ataxin 7-like 3
IDBP-762501
IDBP-762506
IDBP-758911
IDBP-761288
IDBP-759122
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 17:44191805-44200113
Strand Reverse strand
Band q21.31
Transcripts
ENST00000389384 ENSP00000374035
ENST00000454077 ENSP00000397259
ENST00000590537 ENSP00000465210
ENST00000587022
ENST00000593073
ENST00000591295 ENSP00000467092
ENST00000589607
ENST00000591807
ENST00000587097 ENSP00000465614
ENST00000590169 ENSP00000467153
ENST00000589805 ENSP00000466717
ENST00000586688
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 18 experimentally validated interaction(s) in this database.
Experimentally validated
Total 18 [view]
Protein-Protein 18 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003713 transcription coactivator activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0030374 ligand-dependent nuclear receptor transcription coactivator activity
Biological Process
GO:0006325 chromatin organization
GO:0006351 transcription, DNA-templated
GO:0016578 histone deubiquitination
GO:0045893 positive regulation of transcription, DNA-templated
Cellular Component
GO:0000124 SAGA complex
GO:0005634 nucleus
GO:0071819 DUBm complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000059995
View Gene Order
ENSBTAG00000019662
Not yet available
Pathways
NETPATH
REACTOME
REACT_172610
HATs acetylate histones pathway
REACT_172623
Chromatin organization pathway
REACT_172633
Chromatin modifying enzymes pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.512651
RefSeq NM_001098833 NM_020218
HUGO
OMIM
CCDS CCDS42345 CCDS45697
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca