Version 5.4
Homo sapiens Gene: ERGIC2
Summary
InnateDB Gene IDBG-25127.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ERGIC2
Gene Name ERGIC and golgi 2
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000087502
Encoded Proteins
IDBP-25129
ERGIC and golgi 2
IDBP-586818
ERGIC and golgi 2
IDBP-584406
ERGIC and golgi 2
IDBP-596935
ERGIC and golgi 2
IDBP-592935
ERGIC and golgi 2
IDBP-593827
ERGIC and golgi 2
IDBP-590046
ERGIC and golgi 2
IDBP-598283
ERGIC and golgi 2
IDBP-583307
ERGIC and golgi 2
IDBP-584957
ERGIC and golgi 2
IDBP-809732
ERGIC and golgi 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary ERGIC2, or PTX1, is a ubiquitously expressed nuclear protein that is downregulated in prostate carcinoma (Kwok et al., 2001 [PubMed 11445006]).[supplied by OMIM, Aug 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 12:29337352-29381189
Strand Reverse strand
Band p11.22
Transcripts
ENST00000360150 ENSP00000353270
ENST00000549182 ENSP00000447678
ENST00000548909 ENSP00000448585
ENST00000551467 ENSP00000448535
ENST00000548098
ENST00000546509 ENSP00000447212
ENST00000552155 ENSP00000449691
ENST00000546839 ENSP00000450042
ENST00000550353 ENSP00000447165
ENST00000552132 ENSP00000448426
ENST00000548441 ENSP00000448482
ENST00000611644 ENSP00000478266
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 2 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0016192 vesicle-mediated transport
Cellular Component
GO:0005730 nucleolus
GO:0005789 endoplasmic reticulum membrane
GO:0005794 Golgi apparatus
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0043231 intracellular membrane-bounded organelle
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000030304
View Gene Order
ENSBTAG00000011096
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.339453 Hs.660447 Hs.685456
RefSeq NM_016570
HUGO
OMIM
CCDS CCDS41765
HPRD 17932
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca