Version 5.4
Mus musculus Gene: Chodl
Summary
InnateDB Gene IDBG-172075.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Chodl
Gene Name chondrolectin
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000022860
Encoded Proteins
IDBP-172077
chondrolectin
IDBP-172079
chondrolectin
IDBP-252226
chondrolectin
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000154645:
This gene encodes a type I membrane protein with a carbohydrate recognition domain characteristic of C-type lectins in its extracellular portion. In other proteins, this domain is involved in endocytosis of glycoproteins and exogenous sugar-bearing pathogens. This protein localizes predominantly to the perinuclear region. Several transcript variants encoding a few different isoforms have been found for this gene. [provided by RefSeq, Feb 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 16:78930948-78951733
Strand Forward strand
Band C3.1
Transcripts
ENSMUST00000069148 ENSMUSP00000063961
ENSMUST00000023568 ENSMUSP00000023568
ENSMUST00000114216 ENSMUSP00000109854
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0030246 carbohydrate binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005737 cytoplasm
GO:0016021 integral component of membrane
GO:0048471 perinuclear region of cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000154645
View Gene Order
ENSBTAG00000000588
Not yet available
Cross-References
SwissProt
TrEMBL F2Z3Y6
UniProt Splice Variant
Entrez Gene 246048
UniGene Mm.405519 Mm.77895
RefSeq NM_139134 XM_006523030
OMIM
CCDS CCDS28279
HPRD
IMGT
MGI ID MGI:2179069
MGI Symbol Chodl
EMBL AC114925 AC161815
GenPept
RNA Seq Atlas 246048

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca