Version 5.4
Homo sapiens Gene: SBF1
Summary
InnateDB Gene IDBG-13348.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SBF1
Gene Name SET binding factor 1
Synonyms CMT4B3; DENND7A; MTMR5
Species Homo sapiens
Ensembl Gene ENSG00000100241
Encoded Proteins
IDBP-13354
SET binding factor 1
IDBP-13356
SET binding factor 1
IDBP-13358
SET binding factor 1
IDBP-381204
SET binding factor 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 22:50445000-50475025
Strand Reverse strand
Band q13.33
Transcripts
ENST00000380817 ENSP00000370196
ENST00000348911 ENSP00000252027
ENST00000390679 ENSP00000375097
ENST00000399627
ENST00000418590 ENSP00000401538
ENST00000470434
ENST00000473724
ENST00000476293
ENST00000477234
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 16 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 16 [view]
Protein-Protein 15 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 1 [view]
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0008138 protein tyrosine/serine/threonine phosphatase activity
GO:0016791 phosphatase activity
GO:0017112 Rab guanyl-nucleotide exchange factor activity
Biological Process
GO:0006470 protein dephosphorylation
GO:0007283 spermatogenesis
GO:0008219 cell death
GO:0016311 dephosphorylation
GO:0032851 positive regulation of Rab GTPase activity
Cellular Component
GO:0005634 nucleus
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000036529
View Gene Order
ENSBTAG00000021337
Not yet available
Cross-References
SwissProt O95248
TrEMBL A0A024R4Z9 G5E933 Q59EX9 Q68CX1 Q86TK5
UniProt Splice Variant
Entrez Gene 6305
UniGene Hs.589924
RefSeq NM_002972 XM_005261931 XM_005261932 XM_005261934 XM_005261935
HUGO HGNC:10542
OMIM 603560
CCDS CCDS14091
HPRD
IMGT
EMBL AB209682 AF072929 AL096767 BC009268 BC046169 BC087612 CH471138 CR749672 U93181
GenPept AAC39675 AAC78842 AAH09268 AAH46169 AAH87612 BAD92919 CAH18463 CAO03462 EAW73536 EAW73538 EAW73539
RNA Seq Atlas 6305

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca