Version 5.4
Homo sapiens Gene: LIMCH1
Summary
InnateDB Gene IDBG-15373.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LIMCH1
Gene Name LIM and calponin homology domains 1
Synonyms LIMCH1A; LMO7B
Species Homo sapiens
Ensembl Gene ENSG00000064042
Encoded Proteins
IDBP-15375
LIM and calponin homology domains 1
IDBP-15377
LIM and calponin homology domains 1
IDBP-237099
LIM and calponin homology domains 1
IDBP-366510
LIM and calponin homology domains 1
IDBP-482407
LIM and calponin homology domains 1
IDBP-476821
LIM and calponin homology domains 1
IDBP-485384
LIM and calponin homology domains 1
IDBP-482195
LIM and calponin homology domains 1
IDBP-477491
LIM and calponin homology domains 1
IDBP-478676
LIM and calponin homology domains 1
IDBP-480269
LIM and calponin homology domains 1
IDBP-477545
LIM and calponin homology domains 1
IDBP-475330
LIM and calponin homology domains 1
IDBP-475316
LIM and calponin homology domains 1
IDBP-474036
LIM and calponin homology domains 1
IDBP-482688
LIM and calponin homology domains 1
IDBP-483710
LIM and calponin homology domains 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 4:41359607-41700044
Strand Forward strand
Band p13
Transcripts
ENST00000381753 ENSP00000371172
ENST00000313860 ENSP00000316891
ENST00000396595 ENSP00000379840
ENST00000446625 ENSP00000411020
ENST00000513024 ENSP00000425222
ENST00000509638 ENSP00000427311
ENST00000508501 ENSP00000424825
ENST00000512946 ENSP00000424645
ENST00000512228
ENST00000512632 ENSP00000427045
ENST00000514190
ENST00000512820 ENSP00000424437
ENST00000511424 ENSP00000426353
ENST00000515847
ENST00000503057 ENSP00000425631
ENST00000511496 ENSP00000421242
ENST00000514096 ENSP00000426334
ENST00000509277 ENSP00000422864
ENST00000509454 ENSP00000423355
ENST00000508466 ENSP00000421656
ENST00000515785
ENST00000505705
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 13 experimentally validated interaction(s) in this database.
Experimentally validated
Total 13 [view]
Protein-Protein 13 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003779 actin binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0031032 actomyosin structure organization
Cellular Component
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000037736
View Gene Order
ENSBTAG00000010677
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.335163 Hs.595535 Hs.609815 Hs.665200 Hs.705704
RefSeq NM_001112717 NM_001112718 NM_001112719 NM_001112720 NM_001289122 NM_001289124 NM_014988 XM_005248057 XM_005248058 XM_005248059 XM_005248060 XM_005248065 XM_005248066 XM_005248067 XM_005248071 XM_005248072 XM_005248075 XM_006713997
HUGO
OMIM
CCDS CCDS33977 CCDS47047 CCDS54763 CCDS54764 CCDS54765 CCDS75119 CCDS75121
HPRD 11125
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca